Publications

GHT-SELEX demonstrates unexpectedly high intrinsic sequence specificity and complex DNA binding of many human transcription factors

Aug 5, 2026

Nature methods

Arttu Jolma, Aldo Hernandez-Corchado, Ally W H Yang, Ali Fathi, Kaitlin U Laverty, Alexander Brechalov, Rozita Razavi, Mihai Albu, Hong Zheng, Codebook Consortium, Ivan V Kulakovskiy, Hamed S Najafabadi, Timothy R Hughes

Identification of methylation-sensitive human transcription factors using meSMiLE-seq

Aug 5, 2026

Nature communications

Antoni J Gralak, Katerina Faltejskova, Ally W H Yang, Clemence Steiner, Julie Russeil, Nadia Grenningloh, Sachi Inukai, Mustafa Demir, Riccardo Dainese, Cooper Owen, Eugenia V Pankevich, Codebook/GRECO-BIT Consortium, Timothy R Hughes, Ivan V Kulakovskiy, Judith F Kribelbauer-Swietek, Guido van Mierlo, Bart Deplancke

On-demand microfluidic encapsulation of Caenorhabditis elegans in hydrogel for long-term observation via AI detection

Jul 30, 2026

Lab on a chip

Sinthuran Jegatheeswaran, Teo Mesrkhani, Wei Liu, Mohammad Kashif, June H Tan, Basel A Khader, Elodie Lugez, Andrew G Fraser, Dae Kun Hwang

A consensus atlas of human brain development defines cell type-specific maturation trajectories across the lifespan

Jul 29, 2026

bioRxiv : the preprint server for biology

Sridevi Venkatesan, Patricia Nano, Jonathan Werner, Sonia Malaiya, Brian Herb, Yuan Gao, Li Wang, Aparna Bhaduri, Tomasz J Nowakowski, Carlo Colantuoni, Seth A Ament, Jesse Gillis

The Nematicide Tioxazafen Disrupts Proteasome Function via Cytochrome P450 Bioactivation

Jul 29, 2026

bioRxiv : the preprint server for biology

Lucia Chen, Kaiden Thompson, Muntasir Kamal, Kateryna Sihuta, Irini Topalidou, Andrew R Burns, Nazli H Farshour, Brittany Cooke, Jessica Knox, Yanqing Jiang, Modhar Al Qasser, Ermira Shuteriqi, Matej Usaj, Justin Ching, Arthur Flaget, Michael Costanzo, Guihong Tan, Jessica Lacoste, Mark Lautens, Brenda Andrews, Charles Boone, Mikko Taipale, Nicolas J Lehrbach, Peter J Roy

A genome-wide functional analysis of conserved intronic regions reveals essential roles for speckle-associated retained introns

Jul 20, 2026

Cell reports

Shaghayegh Farhangmehr, Ulrich Braunschweig, Mingkun Wu, Syed Nabeel-Shah, Kevin R Brown, Jacob L Fine, Jason Moffat, Benjamin J Blencowe

Functional characterization of obesity using advanced 3D in vitro adipose tissue models

Jul 20, 2026

Biomaterials

Vera M Pieters, Kyle S Nguyen, Penney M Gilbert, Alison P McGuigan

Multiscale harmonization and semantic integration of biomedical data enable biological insights through immersive exploration

Jul 17, 2026

bioRxiv : the preprint server for biology

Andreas Bueckle, Chenchen Zhu, Alex Y H Wong, Archibald Enninful, Yang Miao, Negin Farzad, Maria Pedersen, Courteney Mattison, Nicholas Sloan, Jason Mares, Cheng Xing, Bruce W Herr, Juhi Khare, Yash Kumar, Keyur Parekh, Siddhi Chavan, Paean Luby, Ushma Patel, John Hickey, Gary D Bader, Hemali Phatnani, Vilas Menon, Rong Fan, Peter K Sorger, Michael Snyder, Katy Börner

Ripple effects of a patient & health-system partnered engagement project: a co-developed protocol

Jul 17, 2026

Research involvement and engagement

Isabella Chana, Zeenat Ladak, Stella Medvedyuk, Abimbola Saka, Bikila Amenu, Howard Freedman, Tara Jeji, Vinesha Ramasamy, Jean-Claude Camus, Aisha Lofters, Annemarie Edwards, Christian Finley, Dayne Riche, Gary C Bloch, Jackie Manthorne, Janet Parsons, Jasmine Hochman, Jess Rogers, Jessica Moffat, Joyce Nyhof-Young, Peter Selby, Shari Dworkin, Sherry Espin, Vanessa Redditt, Vanessa Wright, Ambreen Sayani

Systematic investigation reveals extensive Epstein-Barr virus transcriptional regulation of the human genome

Jul 15, 2026

Cell genomics

Phillip J Dexheimer, Matthew R Hass, Lee E Edsall, Arame A Diouf, Sydney H Jones, Omer Donmez, Cailing Yin, Katelyn A Dunn, Carmy Forney, Hayley K Hesse, Andrew VonHandorf, Xiaoting Chen, Sreeja Parameswaran, Olivia E Gittens, Kenyatta C M F Viel, Rozita Razavi, Benjamin E Gewurz, Bo Zhao, Lucinda P Lawson, Timothy R Hughes, Leah C Kottyan, Matthew T Weirauch

Publications

Pagination